Web resources for the CRISPR Cas System

Name

Link

Description

OxfCRISPR

(Liu Lab)

http://www.oxfcrispr.org

Oxford Fly CRISPR Resources

CRISPRflydesign (Bullock Lab)

http://www.crisprflydesign.org/

Offers Cas9 transgenic stocks

DRSC CRISPR finder (Perrimon Lab)

http://www.flyrnai.org/crispr/

A web tool to identify CRISPRs for fly study

FlyCas9

(Ueda Lab)

http://www.shigen.nig.ac.jp/fly/nigfly/cas9/index.jsp

Provides reagents, protocols and online tools for genome engineering by the designer nuclease Cas9 in Drosophila

flyCRISPR(O’Connor-Giles Lab)

http://flycrispr.molbio.wisc.edu/

Fly CRISPR resources

flyCRISPR discussion group

https://groups.google.com/forum/#!forum/flycrispr-discussion-group

A forum for sharing developments, insights, ideas and asking questions related to fly CRISPRs

Fly target sites

(Zhang lab)

http://www.genome-engineering.org/crispr/?page_id=41

For application of Cas9 for site-specific genome editing in eukaryotic cells and organisms

Name

Link

Description

Addgene CRISPR plasmids

 http://www.addgene.org/CRISPR/

A collection of CRISPR plasmids and reagents

Crass: The CRISPR Assembler

http://ctskennerton.github.io/crass/

A program that searches through raw metagenomic reads for CRISPRs

CRISPI

http://crispi.genouest.org/

A web interface with graphical tools and functions allows users to find CRISPR in personal sequences.

CRISPR Discussion Forum

https://groups.google.com/forum/#!forum/crispr

A forum to discuss Genome Engineering using CRISPR/Cas Systems

CRISPRmap

http://rna.informatik.unifreiburg.de/CRISPRmap

Web server provides an automated assignment of newly sequenced CRISPRs to standard classification system

CRISPRs web server

http://crispr.u-psud.fr/

A gateway to publicly accessible CRISPRs database and software, including CRISPRFinder, CRISPRdb and CRISPRcompar

CRISPRTarget

http://bioanalysis.otago.ac.nz/CRISPRTarget

Predicts the most likely targets of CRISPR RNAs

E-CRISP

http://www.e-crisp.org

A software tool to design and evaluate CRISPR target sites

Goldstein lab CRISPR

http://wormcas9hr.weebly.com/

A genome engineering resource for the C. elegans research community

Joung lab CRISPR

http://www.crispr-cas.org/

A genome engineering resource for zebrafish research community

Zhang lab Genome Engineering

http://www.genomeengineering.org/

CRISPR genome engineering resources website

ZiFiT target design tool

http://zifit.partners.org/ZiFiT/

Identifies potential target sites in DNA sequences